Ocean simulation showing turbulence above rough seafloor topography

Publications

Papers

  • Climatic reach of small-scale turbulence in the ocean interior

    Laura Cimoli, Ali Mashayek, Alberto C. Naveira Garabato, Colm-cille P. Caulfield, Matthew H. Alford, Lois Baker, et al.
    Nature Communications, 2026DOI
  • Direct observations of strong jets transporting deep and bottom water into the Indian Ocean through the fracture zones of the Southwest Indian Ridge

    V. V. Menezes, H. Furey, D. J. Torres, F. Bahr, Lois Baker
    Journal of Geophysical Research: Oceans, 2026DOI
  • Efficient Lagrangian averaging with exponential filters

    Abhijeet Minz, Lois Baker, Hossein Kafiabad, Jacques Vanneste
    Physical Review Fluids, 2025DOICode
  • Lagrangian filtering for wave–mean flow decomposition

    Lois Baker, Hossein Kafiabad, Cai Maitland-Davies, Jacques Vanneste
    Journal of Fluid Mechanics, 2025DOICode
  • Near-resonant generation of internal tide superharmonics: comparing theoretical predictions with a global ocean model

    Lois Baker, Alex Doak, Dianfang Bi
    Geophysical Research Letters, 2025DOICode
  • On the role of seamounts in upwelling deep-ocean waters through turbulent mixing

    Ali Mashayek, Jonathan Gula, Lois Baker, Alberto C. Naveira Garabato, Laura Cimoli, James J. Riley, Casimir de Lavergne
    Proceedings of the National Academy of Sciences, 2024DOI
  • Spatiotemporal characteristics of the near-surface turbulent cascade at the submesoscale in the Drake Passage

    P. F. Tedesco, Lois Baker, A. C. Naveira Garabato, M. R. Mazloff, S. T. Gille, C. P. Caulfield, A. Mashayek
    Journal of Physical Oceanography, 2024DOI
  • Boundary Upwelling of Antarctic Bottom Water by Topographic Turbulence

    Lois Baker, Ali Mashayek, Alberto Naveira Garabato
    AGU Advances, 2023DOICode
  • The Impact of Representations of Realistic Topography on Parameterized Oceanic Lee Wave Energy Flux

    Lois Baker, Ali Mashayek
    Journal of Geophysical Research: Oceans, 2022DOICode
  • TAO data support the existence of large high frequency variations in cross-equatorial overturning circulation

    Lois Baker, Mike Bell, Adam Blaker
    Geophysical Research Letters, 2022DOICode
  • A Marginal Stability Paradigm for Shear-Induced Diapycnal Turbulent Mixing in the Ocean

    A. Mashayek, Lois Baker, B. B. Cael, C. P. Caulfield
    Geophysical Research Letters, 2022DOI
  • Surface reflection of bottom generated oceanic lee waves

    Lois Baker, Ali Mashayek
    Journal of Fluid Mechanics, 2021DOICode
  • IPCC Special Report Meeting: Climate Change Around the Globe

    Lizzie Ellison, Lois Baker, Amy Wilson
    Weather, Royal Meteorological Society, 2020DOIPDF
  • The evolution of superharmonics excited by internal tides in non-uniform stratification

    Lois Baker, Bruce Sutherland
    Journal of Fluid Mechanics, 2020DOI
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Preprints

  • Volume-preserving Lagrangian averaging using polar factorization

    Abhijeet Minz, Lois Baker, Jacques Vanneste
    arXiv, 2026arXiv
  • Characterisation of Topographically-Generated Internal Waves in the Arctic Ocean Northward of the Critical Latitude

    Tianshu Liu, Lois Baker, Ali Mashayek
    ESS Open Archive, 2026DOI
  • Oceanic internal tides: do they get phased at the Equator?

    Camille Moisset, Bruce Sutherland, Lois Baker
    arXiv, 2025arXiv
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Software products

  • Online and Offline Lagrangian Filtering with PDEs: Theoretical Framework and Implementation in OceananigansLagrangianFilter.jl [software and dataset]

    Lois Baker
    Zenodo, 2026DOI
  • Characterisation of Topographically-Generated Internal Waves in the Arctic Ocean Northward of the Critical Latitude [software and dataset]

    Tianshu Liu, Lois Baker, Ali Mashayek
    Zenodo, 2026DOI
  • Code and data for “Volume preserving Lagrangian averaging using polar factorization”

    Abhijeet Minz, Lois Baker, Jacques Vanneste
    Zenodo, 2026DOI
  • OceananigansLagrangianFilter.jl: A set of tools to perform online or offline Lagrangian filtering of Oceananigans.jl simulations

    Lois Baker
    Zenodo, 2026DOILink
  • Near-resonant generation of internal tide superharmonics: comparing theoretical predictions with a global ocean model [software and dataset]

    Lois Baker
    Zenodo, 2025DOI
  • Code and data for “Efficient Lagrangian averaging with exponential filters”

    Abhijeet Minz, Lois Baker, Hossein Kafiabad, Jacques Vanneste
    Zenodo, 2025DOI
  • Lagrangian filtering for wave–mean flow decomposition [software and dataset]

    Lois Baker, Hossein Kafiabad, Cai Maitland-Davies, Jacques Vanneste
    Zenodo, 2024DOI
  • Seamount parameters used in Mashayek & Gula et al. PNAS 2024 [dataset]

    Lois Baker
    Zenodo, 2024DOI
  • Boundary upwelling of Antarctic Bottom Water by topographic turbulence [dataset]

    Lois Baker, Ali Mashayek, Alberto C. Naveira Garabato
    Zenodo, 2023DOI
  • lee-wave-solver: Surface reflection of bottom generated oceanic lee waves [software]

    Lois Baker
    Zenodo, 2022DOI
  • The Impact of Representations of Realistic Topography on Parameterized Oceanic Lee Wave Energy Flux [software and data]

    Lois Baker, Ali Mashayek
    Zenodo, 2022DOI
  • TAO data support the existence of large high frequency variations in cross-equatorial overturning circulation [software and data]

    Lois Baker, Mike Bell, Adam Blaker
    Zenodo, 2021DOI
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Other

  • Deep Madagascar Basin Expedition Cruise Report

    V. Menezes, H. Furey, A. Davies, F. Bahr, D. Torres, J. Happell, A. Mau, et al.
    Woods Hole Oceanographic Institution, 2025DOI
  • Editor's Highlight: Overturning Ocean Water by Turbulence

    Our recent paper in AGU Advances was chosen as an Editor’s Highlight – as explained by Nicolas Gruber in Eos.
    Eos, 2024
  • Proceedings of the NFFDy Summer Programme on ‘Data in Fluids’

    A. Atoufi, Lois Baker, F. Contò, M. Crowe, A. Doak, R. Doran, A. Guseva, et al.
    University of Cambridge Repository, 2024Link
  • The generation, propagation, and mixing of oceanic lee waves (PhD thesis)

    Lois Baker
    Imperial College London, 2023DOI
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